JMB-HEADER RAS-JOURNALS EIMB Pleiades Publishing

RUS

             

ENG

YearIMPACT-FACTOR
2024  1,200
2023  1,500
2022  1,200
2021  1,540
2020  1,374
2019  1,023
2018  0,932
2017  0,977
2016  0,799
2015  0,662
2014  0,740
2013  0,739
2012  0,637
2011  0,658
2010  0,654
2009  0,570
2008  0,849
2007  0,805
2006  0,330
2005  0,435
2004  0,623
2003  0,567
2002  0,641
2001  0,490
2000  0,477
1999  0,762
1998  0,785
1997  0,507
1996  0,518
1995  0,502
Vol 60(2026) N 1 p. 1-20; DOI 10.1134/S0026893325700530 Full Text

N.N. Durmanov1,2*, E.V. Putlyaev1,3, V.V. Nosikov1, I.N. Kurochkin1,2

Application of Surface-Enhanced Raman Scattering for RNA Detection

1Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, Moscow, 119334 Russia
2Faculty of Chemistry, Moscow State University, Moscow, 119991 Russia
3Faculty of Fundamental Medicine, Moscow State University, Moscow, 119991 Russia


*durmanstain@yandex.ru
Received - 2024-12-03; Revised - 2025-06-26; Accepted - 2025-08-20

The detection of specific RNA molecules is a critical task for modern molecular diagnostics of infectious, oncological, and other diseases. This review provides a comprehensive analysis of the application of surface-enhanced Raman spectroscopy (SERS), a powerful technique with unique sensitivity and potential for point-of-care (POC) testing. It covers the physical principles of SERS, the types and features of nanoplasmonic substrates (Au/Ag colloids, lithographic arrays), and key strategies for RNA detection: amplification-free methods (direct detection, SERS reporter-based approaches including sandwich assays and induced aggregation) and enzyme-free amplification methods, primarily hybridization chain reaction (HCR) and catalytic hairpin assembly (CHA). Special attention is paid to progress in developing highly sensitive systems based on aptamers, which provide specific target recognition and initiation of HCR/CHA signaling cascades, as well as combinations of these methods. Key achievements in sensitivity (down to the attomolar level) and multiplexing are highlighted. The main challenges are analyzed: the need to improve substrate reproducibility, the influence of the RNA tertiary structure and protein complexes on target accessibility, optimization of affinity elements (aptamers), and integration into microfluidic platforms. It is concluded that significant progress has been made in the field of SERS-based RNA detection and emphasized that overcoming existing limitations, particularly through the use of aptamers and accounting for the native RNA structure, paves the way for creating a new generation of highly sensitive, specific, and POC-suitable diagnostic tools.

surface-enhanced Raman scattering (SERS), RNA detection, diagnostics, microRNA (miRNA), viral RNA, aptamers, hybridization chain reaction (HCR), catalytic hairpin assembly (CHA), nanoplasmonic substrates, point-of-care (POC) diagnostics, RNA tertiary structure



JMB-FOOTER RAS-JOURNALS